p-value: | 1e-115 |
log p-value: | -2.661e+02 |
Information Content per bp: | 1.737 |
Number of Target Sequences with motif | 316.0 |
Percentage of Target Sequences with motif | 36.57% |
Number of Background Sequences with motif | 3988.2 |
Percentage of Background Sequences with motif | 8.42% |
Average Position of motif in Targets | 50.3 +/- 22.3bp |
Average Position of motif in Background | 50.1 +/- 32.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.13 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 1 |
Score: | 0.95 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | MCAACAAWGG --RACAAWGG |
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Sox2/MA0143.3/Jaspar
Match Rank: | 2 |
Score: | 0.94 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | MCAACAAWGG --AACAAAGG |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.93 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MCAACAAWGG- -GAACAATGGN |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 4 |
Score: | 0.93 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | MCAACAAWGG RNAACAATGG |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 5 |
Score: | 0.92 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | MCAACAAWGG VRAACAATGG |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 6 |
Score: | 0.91 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | MCAACAAWGG VRRACAAWGG |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 7 |
Score: | 0.91 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | MCAACAAWGG- -RAACAATGGN |
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SOX9/MA0077.1/Jaspar
Match Rank: | 8 |
Score: | 0.89 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MCAACAAWGG -GAACAATGG |
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Sox3/MA0514.1/Jaspar
Match Rank: | 9 |
Score: | 0.87 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | MCAACAAWGG AAAACAAAGG |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 10 |
Score: | 0.87 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---MCAACAAWGG---- ATAAGAACAAAGGACTA |
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