Information for 5-GCTGACCTGKAGCTGG (Motif 9)

C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
Reverse Opposite:
A T G C A G T C G C T A A C T G G A T C A C G T G T A C G A T C C G T A A C T G A C T G G A C T T G A C G T C A A T C G G A T C
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 25.9bp
Average Position of motif in Background52.1 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTGACCTGKAGCTGG
GCTGACCTTGAACTN-
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTGACCTGKAGCTGG
NNACTTACCTN-------
 A C G T A C G T C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGACCTGKAGCTGG
--TGACCT--------
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTGACCTGKAGCTGG
GATGACGTGGCANT--
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTGACCTGKAGCTGG
--TGACCTTGACCT--
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGACCTGKAGCTGG
CCTCACCTG-------
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGACCTGKAGCTGG
--TGACCTTGAT----
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTGACCTGKAGCTGG---
-BTGACCTCTNNHTGACCY
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G A C G T A C G T A C G T
A C G T A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGACCTGKAGCTGG
--TGACCTTGACCT--
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCTGACCTGKAGCTGG
RYHYACCTGB------
 C A T G A T G C C A G T A C T G C T G A A G T C T G A C G C A T C T A G A C T G T G C A C T A G G T A C C G A T A C T G A T C G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T