Information for 6-GYYCTTASAAWTG (Motif 8)

A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C G T C A C G A T A C G T A C G T A T C G C G A T C G T A C G T A C T A G C T A G C T A G A G T C
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 20.5bp
Average Position of motif in Background21.4 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GYYCTTASAAWTG
TTTCTNAGAAAN-
 A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GYYCTTASAAWTG
--CCTTTGATGT-
 A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GYYCTTASAAWTG
-TTCTTGGAAAN-
 A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GYYCTTASAAWTG
--CCTTTGAWGT-
 A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GYYCTTASAAWTG
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GYYCTTASAAWTG-
NNCNNAACAATTNT
 A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GYYCTTASAAWTG-
TATCATTAGAACGCT
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GYYCTTASAAWTG----
TNCNNAACAATTTTTNC
 A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GYYCTTASAAWTG
BCMATTAG-----
 A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GYYCTTASAAWTG
---RNAACAATGG
 A C T G A G T C A G T C A G T C A C G T A C G T C G T A A T G C C G T A C G T A C G T A A C G T A C T G
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G