p-value: | 1e-17 |
log p-value: | -3.991e+01 |
Information Content per bp: | 1.691 |
Number of Target Sequences with motif | 82.0 |
Percentage of Target Sequences with motif | 10.37% |
Number of Background Sequences with motif | 1643.1 |
Percentage of Background Sequences with motif | 3.47% |
Average Position of motif in Targets | 53.0 +/- 24.0bp |
Average Position of motif in Background | 49.7 +/- 30.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
POU3F2/MA0787.1/Jaspar
Match Rank: | 1 |
Score: | 0.86 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATGCTAATTA TTATGCAAATTA |
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Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 2 |
Score: | 0.86 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATGCTAATTA- WATGCAAATGAG |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 3 |
Score: | 0.85 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATGCTAATTA- TATGCWAATBAV |
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POU3F3/MA0788.1/Jaspar
Match Rank: | 4 |
Score: | 0.85 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATGCTAATTA ATTATGCTAATTT |
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POU1F1/MA0784.1/Jaspar
Match Rank: | 5 |
Score: | 0.85 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATGCTAATTA- AATATGCAAATTAG |
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Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
Match Rank: | 6 |
Score: | 0.84 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATGCTAATTA --NCTAATTA |
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VSX2/MA0726.1/Jaspar
Match Rank: | 7 |
Score: | 0.83 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ATGCTAATTA- ---CTAATTAG |
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LHX2/MA0700.1/Jaspar
Match Rank: | 8 |
Score: | 0.83 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATGCTAATTA-- --ACTAATTAAC |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 9 |
Score: | 0.83 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATGCTAATTA TTATGCAAATTA |
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EMX2/MA0886.1/Jaspar
Match Rank: | 10 |
Score: | 0.83 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATGCTAATTA-- --NCTAATTANN |
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