Information for 6-CAGYRGGDGK (Motif 5)

A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G
Reverse Opposite:
G T A C G T A C G A T C A G T C G T A C G A C T C T A G G T A C C G A T A C T G
p-value:1e-18
log p-value:-4.193e+01
Information Content per bp:1.678
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif10.75%
Number of Background Sequences with motif1687.7
Percentage of Background Sequences with motif3.56%
Average Position of motif in Targets55.2 +/- 26.3bp
Average Position of motif in Background50.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CAGYRGGDGK--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CAGYRGGDGK
CACAGCAGGGGG
 A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CAGYRGGDGK
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CAGYRGGDGK--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----CAGYRGGDGK
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CAGYRGGDGK--
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CAGYRGGDGK
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CAGYRGGDGK--
CACAGCGGGGGGTC
 A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CAGYRGGDGK
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAGYRGGDGK--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C C G T A A C T G A G T C C T G A A C T G A C T G C T A G C A T G C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G