Information for 6-RCWMCACCTTGGMMAR (Motif 14)

C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
Reverse Opposite:
A G T C A G C T A C T G A C T G A G T C A G T C G T C A C T G A A C T G T A C G A C G T A C T G A C G T C G A T A C T G G A T C
p-value:1e-9
log p-value:-2.182e+01
Information Content per bp:1.828
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 26.0bp
Average Position of motif in Background39.3 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-RCWMCACCTTGGMMAR----
TTCAGCACCATGGACAGCGCC
 A C G T C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:RCWMCACCTTGGMMAR----
TCAGCACCATGGACAGCTCC
 C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---RCWMCACCTTGGMMAR
NNGGCGACACCTCNNN---
 A C G T A C G T A C G T C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RCWMCACCTTGGMMAR
--ACCACCTGTT----
 C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RCWMCACCTTGGMMAR
NNNNATGACCTTGANTN-
 A C G T A C G T C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.57
Offset:8
Orientation:forward strand
Alignment:RCWMCACCTTGGMMAR
--------TTGGCA--
 C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:RCWMCACCTTGGMMAR
--AACACCTGCT----
 C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:RCWMCACCTTGGMMAR
-------NTTGGCANN
 C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:RCWMCACCTTGGMMAR
--NNCACCTGNN----
 C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:RCWMCACCTTGGMMAR
--CGCACCTGCT----
 C T A G G T A C C G T A T G A C G T A C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T A C G T A C C T G A C T A G
A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T