Information for 6-KGGCANTGTC (Motif 7)

A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C
Reverse Opposite:
T C A G T C G A T G A C C G T A A G C T C A G T A C T G G T A C T A G C T G C A
p-value:1e-11
log p-value:-2.582e+01
Information Content per bp:1.482
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.85%
Number of Background Sequences with motif1177.5
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets45.5 +/- 26.0bp
Average Position of motif in Background51.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--KGGCANTGTC
NTTGGCANN---
 A C G T A C G T A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-KGGCANTGTC
TTGGCA-----
 A C G T A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---KGGCANTGTC
TNNGGGCAG----
 A C G T A C G T A C G T A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--KGGCANTGTC----
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C A C G T A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---KGGCANTGTC
NGTGGGCAT----
 A C G T A C G T A C G T A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---KGGCANTGTC
GGTTGGCAT----
 A C G T A C G T A C G T A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---KGGCANTGTC
NNTTGGCANN---
 A C G T A C G T A C G T A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KGGCANTGTC--
--CCWTTGTYYB
 A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KGGCANTGTC--
--CCATTGTTTT
 A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C A C G T A C G T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--KGGCANTGTC
CTTGGCAA----
 A C G T A C G T A C G T A T C G C A T G T G A C G T C A T C G A G C A T A C T G A G C T A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T