Information for 2-GTCACGTGACGGCAGA (Motif 3)

T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
Reverse Opposite:
A C G T A G T C G A C T A C T G T A G C G T A C C A T G A G C T A T G C G C T A G A T C T A C G A C G T A C T G T C G A A G T C
p-value:1e-17
log p-value:-3.945e+01
Information Content per bp:1.633
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif88.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets55.2 +/- 22.3bp
Average Position of motif in Background57.5 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE41/MA0636.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GTCACGTGACGGCAGA
GTCACGTGAC------
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:2
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GTCACGTGACGGCAGA
BRGTCACGTGAC------
 A C G T A C G T T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTCACGTGACGGCAGA
-TCACGTGACCGG---
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G A C G T A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GTCACGTGACGGCAGA
ATCACGTGAC------
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GTCACGTGACGGCAGA
ATCACGTGAC------
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:6
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTCACGTGACGGCAGA
ATCACGTGAC------
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTCACGTGACGGCAGA
ATCACGTGAC------
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTCACGTGACGGCAGA
RTCATGTGAC------
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GTCACGTGACGGCAGA
-NCACGTGACN-----
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GTCACGTGACGGCAGA
-TCACGTGACC-----
 T A C G A G C T T G A C T G C A A G T C C T A G C A G T A T C G C T G A G T A C C A T G A C T G T G A C C T G A T A C G T G C A
A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T