Information for 15-CAGATGCCCA (Motif 25)

A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.210e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.8 +/- 21.5bp
Average Position of motif in Background50.3 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CAGATGCCCA--
---ATGCCCACC
 A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAGATGCCCA-----
GGGTGTGCCCAAAAGG
 A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CAGATGCCCA--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGCCCA
AACAGATGGC--
 A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CAGATGCCCA
NNVVCAGCTGBN--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGCCCA
AACAGATGGT--
 A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CAGATGCCCA
VNAVCAGCTGGC--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CAGATGCCCA----
----TGCCCAGNHW
 A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGCCCA
AACAKATGGY--
 A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAGATGCCCA--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G