Information for 7-TGACTTGGCAGCC (Motif 13)

A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A C G T A C T G G T A C A G T C C G T A C T G A C T A G A C G T A T G C C G T A
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.5 +/- 15.7bp
Average Position of motif in Background46.3 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TGACTTGGCAGCC
---CTTGGCAA--
 A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGACTTGGCAGCC
--NNTTGGCANN-
 A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGACTTGGCAGCC
TGATGACGTGGCAN--
 A C G T A C G T A C G T A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGACTTGGCAGCC
NGATGACGTGGCAN--
 A C G T A C G T A C G T A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGACTTGGCAGCC
---NTTGGCANN-
 A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGACTTGGCAGCC
----TTGGCA---
 A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGACTTGGCAGCC
---VBTGWCAGCB
 A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGACTTGGCAGCC
----TTGACAGC-
 A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGACTTGGCAGCC
----YTGWCADY-
 A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGACTTGGCAGCC
TTGCCATGGCAACN
 A C G T A C G T A T C G G T C A A G T C A G C T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C