Information for 6-ACCCTGWCCTGAC (Motif 12)

C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C
Reverse Opposite:
A C T G A G C T G T A C C G T A A T C G A C T G G C T A A T G C G T C A A C T G C T A G A T C G A C G T
p-value:1e-10
log p-value:-2.427e+01
Information Content per bp:1.814
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 22.3bp
Average Position of motif in Background60.9 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA(var.2)/MA0730.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTGWCCTGAC--
TGACCTTTGCATGACCT
 A C G T A C G T C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C A C G T A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTGWCCTGAC
TGACCTTGACCT---
 A C G T A C G T C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTGWCCTGAC
TGACCTTGACCT---
 A C G T A C G T C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACCCTGWCCTGAC--
BTGACCTCTNNHTGACCY
 A C G T A C G T A C G T C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACCCTGWCCTGAC
--CCTCACCTG--
 C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C
A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACCCTGWCCTGAC
----TGACCTYA-
 C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTGWCCTGAC--
TGACCTTTANTTGACCT
 A C G T A C G T C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C A C G T A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACCCTGWCCTGAC-
TGWCCTCARNTGACC
 A C G T C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:ACCCTGWCCTGAC--
--------TTGACAG
 C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACCCTGWCCTGAC
---ATGGGGTGAT
 C G T A A T G C A G T C A G T C A C G T A T C G C G A T T A G C A T G C C G A T A C T G C T G A A G T C
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T