Information for 3-TGGSTAGAACCAKAAA (Motif 8)

C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A
Reverse Opposite:
A C G T C G A T C A G T T G A C A C G T A C T G C A T G A C G T A C G T A T G C A C G T C G T A T A C G G T A C A G T C G C T A
p-value:1e-10
log p-value:-2.346e+01
Information Content per bp:1.728
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.8 +/- 25.2bp
Average Position of motif in Background44.1 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0072.1_Sox5_1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGSTAGAACCAKAAA--
--TTTAGAACAATAAAAT
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGGSTAGAACCAKAAA--
--TTAAGAACAATAAATT
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGGSTAGAACCAKAAA--
------GAAACTGAAACT
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGGSTAGAACCAKAAA--
------GAAAGTGAAAGT
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGGSTAGAACCAKAAA--
----TCGAAACCGAAACT
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGSTAGAACCAKAAA
-NTTNAGAACAATTA-
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A
A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TGGSTAGAACCAKAAA--
------GAAAMTGAAACT
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TGGSTAGAACCAKAAA-
------AAGCCATAAAA
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGGSTAGAACCAKAAA----
-----GGAAANTGAAACTNA
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGGSTAGAACCAKAAA---
--TNNAGAACAATANATNN
 C G A T A C T G A C T G A T G C G A C T T G C A T A C G C G T A C G T A G A T C G T A C G T C A A C T G G T C A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C