Information for 4-CTTGGMACGGCCC (Motif 5)

A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A T G C G A T C A C T G A C G T A C T G A T G C T A G C C G T A T C G A A C T G
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.782
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif50.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets41.8 +/- 21.5bp
Average Position of motif in Background49.9 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTGGMACGGCCC
---GGAAATCCCC
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CTTGGMACGGCCC---
-------CTGCCCGCA
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTGGMACGGCCC
CTTGGCAA-----
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTGGMACGGCCC
--TGGAACAGMA-
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTTGGMACGGCCC------
---GGGTGTGCCCAAAAGG
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGMACGGCCC
NNTTGGCANN----
 A C G T A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTTGGMACGGCCC
----YAACBGCC-
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTTGGMACGGCCC
---GGAAANCCCC
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTTGGMACGGCCC-
--GGGAAATCCCCN
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTTGGMACGGCCC---
------AAGACCCYYN
 A G T C A G C T A C G T A T C G A T C G T G A C C G T A T G A C C T A G A T C G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C