Information for 15-AGAAAAAAGAGAG (Motif 19)

C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G
Reverse Opposite:
A G T C A C G T A G T C A C G T A G T C A C G T A G C T A C G T A C G T A G C T A C G T A G T C A G C T
p-value:1e-4
log p-value:-1.040e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets31.0 +/- 7.8bp
Average Position of motif in Background38.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGAAAAAAGAGAG
TACTGGAAAAAAAA---
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGAAAAAAGAGAG
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAAAAAAGAGAG
AGAAACGAAAGT-
 C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAAAAAAGAGAG
AGATAAGA-----
 C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGAAAAAAGAGAG
CAAAAGTAAACAAAG--
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGAAAAAAGAGAG----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGAAAAAAGAGAG---
AGAAGAACAAAGGACTA
 A C G T C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAAAAAAGAGAG--
-AAGATAAGATAACA
 C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGAAAAAAGAGAG
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAAAAAAGAGAG---
-AGAAAGTGAAAGTGA
 C T G A C T A G C G T A C T G A C G T A C G T A C T G A C G T A C T A G C G T A A C T G C G T A T A C G A C G T A C G T A C G T
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A