Information for 7-AGGCCKCYATGTC (Motif 11)

G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C
Reverse Opposite:
A T C G C G T A A T G C C G T A G A C T C T A G A C T G G T C A A C T G A C T G A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.804
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 29.0bp
Average Position of motif in Background69.4 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCKCYATGTC
CTAGGCCT-------
 A C G T A C G T G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCKCYATGTC
CNAGGCCT-------
 A C G T A C G T G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGCCKCYATGTC
AGGVNCCTTTGT-
 G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AGGCCKCYATGTC--
--------NTGTCAN
 G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGCCKCYATGTC-
--GCCGCCATCTTG
 G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCKCYATGTC
CAGGCCNNGGCCNN
 A C G T G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGCCKCYATGTC-
NAGGTCACNNTGACC
 A C G T G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGCCKCYATGTC--
AGGTCACCCTGACCT
 G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AGGCCKCYATGTC--
-------CCTGTCAA
 G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGGCCKCYATGTC-
GTAGGTCACTGGGTCA
 A C G T A C G T G T C A A C T G A C T G A G T C G T A C A C G T G T A C A G T C C G T A C G A T A T C G A C G T A T G C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A