Information for 12-GGCCAAGCCT (Motif 21)

A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T
Reverse Opposite:
C T G A T A C G A T C G A G T C G A C T A C G T A T C G C T A G A G T C A G T C
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.852
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets40.7 +/- 20.8bp
Average Position of motif in Background55.3 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAAGCCT---
NNGGCCACGCCTTTN
 A C G T A C G T A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGCCAAGCCT
---CAAGCTT
 A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCCAAGCCT
TGCCAA----
 A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGCCT
CGTGCCAAG---
 A C G T A C G T A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGCCT
AGGCCTAG---
 A C G T A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCCAAGCCT-----
GACCACGCCCTTATT
 A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAAGCCT--
CAGGCCNNGGCCNN
 A C G T A C G T A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGCCAAGCCT
--CNAGGCCT
 A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGCCT
GGTGCCAAGT--
 A C G T A C G T A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGCCT
GAGSCCGAGC--
 A C G T A C G T A C T G A C T G A G T C A T G C C G T A C T G A A C T G A T G C A G T C A G C T
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T