Information for 9-TAATWACAAT (Motif 16)

A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T
Reverse Opposite:
C G T A A C G T C G A T C T A G A G C T C G T A T G C A A C G T C G A T G T C A
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.766
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets37.9 +/- 30.0bp
Average Position of motif in Background46.9 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0064.1_Sox14_1/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAATWACAAT----
GCTAATTATAATTATC
 A C G T A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TAATWACAAT----
NNTAATTATAATNANN
 A C G T A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TAATWACAAT----
TATAATTATAATATTC
 A C G T A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TAATWACAAT--
NTTNAGAACAATTA
 A C G T A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TAATWACAAT----
NNTNANAACAATTNNA
 A C G T A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TAATWACAAT-----
TTAAGAACAATAAATT
 A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAATWACAAT---
AAAAATAACAAACGG
 A C G T A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATWACAAT------
TNNAGAACAATANATNN
 A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

VAX1/MA0722.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATWACAAT
CTAATTAC---
 A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T
A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATWACAAT
CTAATTAC---
 A C G T A C G T C G T A C G T A A C G T C G A T T C G A A G T C C G T A C G T A C G A T
A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T A C G T