Information for 2-AATGTTTGTGGTTCTT (Motif 5)

C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
Reverse Opposite:
C G T A C T G A A C T G T C G A G T C A G A T C A T G C C G T A A T G C C G T A T C G A G T C A A G T C T C G A A C G T A C G T
p-value:1e-18
log p-value:-4.244e+01
Information Content per bp:1.677
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.3 +/- 24.6bp
Average Position of motif in Background32.2 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AATGTTTGTGGTTCTT
---NNHTGTGGTTWN-
 C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AATGTTTGTGGTTCTT
---GTCTGTGGTTT--
 C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AATGTTTGTGGTTCTT
----NNTGTGGTTT--
 C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AATGTTTGTGGTTCTT
----GCTGTGGTTT--
 C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AATGTTTGTGGTTCTT
-----CTGTGGTTTN-
 C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AATGTTTGTGGTTCTT
----TTTGCGGTTT--
 C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AATGTTTGTGGTTCTT-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

SOX21/MA0866.1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---AATGTTTGTGGTTCTT
AACAATGGTAGTGTT----
 A C G T A C G T A C G T C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AATGTTTGTGGTTCTT
-NTGGGTGTGGCC---
 C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.47
Offset:2
Orientation:forward strand
Alignment:AATGTTTGTGGTTCTT
--AGTTTCAGTTTC--
 C G T A G T C A A C G T T A C G C A G T A G C T C G A T A T C G C G A T T A C G C T A G C A G T A G C T A G T C G A C T C G A T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T