Information for 6-TAAAYCAAACCACACA (Motif 19)

G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A
Reverse Opposite:
G A C T A C T G A G C T A C T G A C G T C T A G C A T G A C G T A G C T C G A T C A T G C T G A C A G T C G A T C A G T C T G A
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.659
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif156.4
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets60.6 +/- 23.9bp
Average Position of motif in Background53.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:TAAAYCAAACCACACA
------AAACCACANN
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TAAAYCAAACCACACA
-----NAAACCACAG-
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TAAAYCAAACCACACA-
-----NWAACCACADNN
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:TAAAYCAAACCACACA-
------AAACCACAGAN
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TAAAYCAAACCACACA
------AAACCACAGC
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TAAAYCAAACCACACA
------AAACCGCAAA
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TAAAYCAAACCACACA
------AAACCGCAA-
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAAYCAAACCACACA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAAAYCAAACCACACA
ATATCAAAACAAAACA
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TAAAYCAAACCACACA-----
-----CGAAGCACACAAAATA
 G A C T G C T A C G T A G C T A G A C T G T A C G C T A T C G A G T C A G T A C G A T C T C G A G T A C C T G A T G A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A