Information for 4-TGTGGTTTTA (Motif 3)

C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
Reverse Opposite:
C A G T C T G A C G T A G T C A C T G A A T G C G T A C C G T A A G T C C G T A
p-value:1e-20
log p-value:-4.702e+01
Information Content per bp:1.849
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif252.5
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets53.4 +/- 24.2bp
Average Position of motif in Background48.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTTA
NNTGTGGTTT--
 A C G T A C G T C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTTA
CTGTGGTTTN-
 A C G T C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTTA
GTCTGTGGTTT--
 A C G T A C G T A C G T C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTTA
GCTGTGGTTT--
 A C G T A C G T C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTTA
NNHTGTGGTTWN-
 A C G T A C G T A C G T C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTTA
TTTGCGGTTT--
 A C G T A C G T C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTTA
TTGCGGTTT--
 A C G T C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTTA-
TGTGGATTNNN
 C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTTA
NNTGTGGATTSS
 A C G T A C G T C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGTGGTTTTA--
--TGGTTTCAGT
 C G A T A C T G C G A T A C T G A T C G A G C T A C G T A C G T G A C T G T C A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T