Information for 15-AMTSTTMSCWWAG (Motif 17)

C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T G C A T C G A T A C T G A T C G A C T G C G T A C G T A A T C G C G T A A C T G A C G T
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.815
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.5 +/- 28.5bp
Average Position of motif in Background48.4 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AMTSTTMSCWWAG----
NSTGTTTRCWCAGBNNN
 C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AMTSTTMSCWWAG-
--TGTTTACTTAGG
 C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AMTSTTMSCWWAG-
BSNTGTTTACWYWGN
 A C G T C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AMTSTTMSCWWAG-
AATATTAATAAAGA
 C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AMTSTTMSCWWAG
TCCATGTTTACTTTG
 A C G T A C G T C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AMTSTTMSCWWAG
-ATATTTACATA-
 C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AMTSTTMSCWWAG
ATTGTTA------
 C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AMTSTTMSCWWAG
--TGTTTACTTT-
 C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AMTSTTMSCWWAG
NNTTTATTGTTCTNNN--
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AMTSTTMSCWWAG
--TGTTTACTTT-
 C G T A G T A C A C G T A T G C A C G T A C G T T G A C A T G C A G T C C G T A C G T A C G T A A C T G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T