Information for 10-WAAACGTGTC (Motif 11)

C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
Reverse Opposite:
A C T G C T G A A G T C C G T A A G T C A C T G A C G T A C G T A C G T C G A T
p-value:1e-10
log p-value:-2.341e+01
Information Content per bp:1.906
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.8 +/- 31.5bp
Average Position of motif in Background37.2 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:WAAACGTGTC
AACACGTGTT
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:WAAACGTGTC
-RTACGTGC-
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:WAAACGTGTC
-ACACGTGGC
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

Hes2/MA0616.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:WAAACGTGTC----
-GCACGTGTCNNNN
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:WAAACGTGTC
GGCACGTGNC
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

Arnt/MA0004.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:WAAACGTGTC
--CACGTG--
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:WAAACGTGTC
NACACGTGCN
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:WAAACGTGTC
-GGACGTGC-
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:WAAACGTGTC
GACACGTGCC
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:WAAACGTGTC
NVCACGTG--
 C G T A C G T A C G T A C G T A G T A C A C T G A C G T A C T G A G C T A G T C
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T