Information for 4-GCTTGGCAADTTAAAT (Motif 10)

A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T
Reverse Opposite:
G T C A C G A T A C G T A C G T G C T A C G T A G C T A C G A T C A G T A C T G A G T C G T A C G T C A C G T A A C T G G T A C
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.776
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 28.6bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCTTGGCAADTTAAAT
-----NGCAATTAAA-
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GCTTGGCAADTTAAAT--
-------ATATTAATTAA
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTTGGCAADTTAAAT------
-----GAAAATTAATTACTTCG
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0174.1_Vax1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTTGGCAADTTAAAT-
-CTNNGNTAATTAACNT
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T A C G T
A C G T G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTTGGCAADTTAAAT------
-----GAAAATTAATTACTTTG
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.57
Offset:9
Orientation:forward strand
Alignment:GCTTGGCAADTTAAAT
---------ATTAAA-
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCTTGGCAADTTAAAT
WDNCTGGGCA--------
 A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCTTGGCAADTTAAAT-
----GATTAATTAATTT
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCTTGGCAADTTAAAT
-------NATTCAAAT
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTTGGCAADTTAAAT
-ATTTGCATAACAAAG
 A C T G A G T C A C G T A C G T A C T G A C T G G T A C G T C A C G T A C A G T A C G T C G A T G T C A C G T A C G T A A C G T
A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G