Information for 13-GAATTTCCTT (Motif 17)

A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T
Reverse Opposite:
C G T A G T C A C T A G A C T G C G T A C T G A C G T A C A G T A C G T T G A C
p-value:1e-9
log p-value:-2.276e+01
Information Content per bp:1.826
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif211.8
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets44.7 +/- 27.2bp
Average Position of motif in Background49.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GAATTTCCTT
GGGAATTTCC--
 A C G T A C G T A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GAATTTCCTT
GGGAATTTCC--
 A C G T A C G T A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GAATTTCCTT--
--ATTTCCTGTN
 A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PB0012.1_Elf3_1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAATTTCCTT---
TTACTTCCTNGTN
 A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

PB0169.1_Sox15_2/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAATTTCCTT---
TNGAATTTCATTNAN
 A C G T A C G T A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAATTTCCTT
GGGGATTTCC--
 A C G T A C G T A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAATTTCCTT
AAGATATCCTT
 A C G T A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAATTTCCTT-
-ATTTTCCATT
 A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T A C G T
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAATTTCCTT-
-ATTTTCCATT
 A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T A C G T
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAATTTCCTT--
--ACTTCCTGBT
 A C T G T G C A G T C A C G A T A G C T C G A T T G A C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T