Information for 12-TAGCAACAGA (Motif 16)

C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A
Reverse Opposite:
C G A T A G T C C G A T A T C G A C G T C G A T T C A G A G T C C G A T C G T A
p-value:1e-10
log p-value:-2.347e+01
Information Content per bp:1.830
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif112.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets47.8 +/- 27.3bp
Average Position of motif in Background53.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TAGCAACAGA
SCCTAGCAACAG-
 A C G T A C G T A C G T C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAACAGA
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.74
Offset:-9
Orientation:forward strand
Alignment:---------TAGCAACAGA----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAACAGA
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAGCAACAGA
TTGCAACATN
 C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------TAGCAACAGA
TGTTKCCTAGCAACM--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAGCAACAGA---
ATGCAACAGGTGG
 C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A A C G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGCAACAGA-----
GAGCAACAGGTGGTT
 C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAGCAACAGA-
-TGGAACAGMA
 C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGCAACAGA
ATTGCATCAK-
 A C G T C G A T C G T A C T A G A G T C C G T A T G C A A T G C C G T A C T A G C G T A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T