Information for 2-TGTGTGGWCAGTGGTC (Motif 8)

A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C
Reverse Opposite:
A T C G C T G A T G A C A G T C C G T A A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G T A A T G C G T C A
p-value:1e-13
log p-value:-3.174e+01
Information Content per bp:1.811
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.9 +/- 26.6bp
Average Position of motif in Background64.0 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGGWCAGTGGTC
NNHTGTGGTTWN-----
 A C G T A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGTGTGGWCAGTGGTC-
--AGGGGTCAGAGGTCA
 A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C A C G T
A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGTGTGGWCAGTGGTC-
---GAGGTCAAAGGTCA
 A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C A C G T
A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTGTGGWCAGTGGTC
-CTGTGGTTTN-----
 A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTGTGGWCAGTGGTC
GCTGTGGTTT------
 A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTGTGGWCAGTGGTC-----
----CGAACAGTGCTCACTAT
 A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGGWCAGTGGTC
GTCTGTGGTTT------
 A C G T A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTGTGGWCAGTGGTC-
---NAGGTCANTGACCT
 A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTGTGGWCAGTGGTC
--TRAGGTCA------
 A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGGWCAGTGGTC
NTNTATGTGCACATNNN--
 A C G T A C G T A C G T A C G T T A C G A C G T A T C G A C G T A C T G A C T G C G A T A G T C C G T A A C T G C G A T C T A G A C T G A G C T T A G C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T