Information for 4-GGAAAGCCCCAGGGCC (Motif 13)

C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
Reverse Opposite:
A T C G A C T G A G T C A G T C A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C
p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.2 +/- 16.9bp
Average Position of motif in Background39.9 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGAAAGCCCCAGGGCC
GGAAANCCCC------
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGAAAGCCCCAGGGCC
GGAAATCCCC------
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAGCCCCAGGGCC
GGGAAATCCCCN-----
 A C G T C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGAAAGCCCCAGGGCC
GGAAATTCCC------
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGAAAGCCCCAGGGCC
----TGCCCCAGGGCA
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
A C G T A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GGAAAGCCCCAGGGCC-
-----GCCTCAGGGCAT
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGAAAGCCCCAGGGCC
----TGCCCCAGGGCA
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGAAAGCCCCAGGGCC-
---TTGCCCTAGGGCAT
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C A C G T
A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGAAAGCCCCAGGGCC
GGAAATTCCC------
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGAAAGCCCCAGGGCC
----TGCCCCCGGGCA
 C T A G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C T A G C C G T A A C T G A C T G C T A G G T A C T A G C
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A