Information for 19-AATGCATGCAATG (Motif 22)

C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G
Reverse Opposite:
A G T C C G T A A G C T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.926
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 36.7bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AATGCATGCAATG-
ATTTGCATACAATGG
 A C G T C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AATGCATGCAATG--
---AGATGCAATCCC
 C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AATGCATGCAATG
-TBGCACGCAA--
 C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATGCATGCAATG-----
-NNNANTGCAGTGCNNTT
 C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATGCATGCAATG-
NNCATTCATTCATNNN
 A C G T A C G T C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AATGCATGCAATG
GACCACATTCATACAAT-
 A C G T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AATGCATGCAATG--
AATATACATGTAATATA
 A C G T A C G T C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AATGCATGCAATG
ACATTCATGACACG
 A C G T C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATGCATGCAATG--
AAAATACATGTAATACT
 A C G T A C G T C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AATGCATGCAATG--
TAAATACATGTAAAATT
 A C G T A C G T C G T A T G C A A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A T C G A A C G T C T A G A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T