Information for 12-CTCGTCACAC (Motif 20)

A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C
Reverse Opposite:
T C A G A C G T A C T G A C G T A C T G T C G A A G T C A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.879
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif45.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.0 +/- 32.3bp
Average Position of motif in Background47.3 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTCGTCACAC
NTTATTCGTCATNC
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTCGTCACAC---
---GTCACATGAY
 A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCGTCACAC
GCTCGTAAAAA
 A C G T A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCGTCACAC--
----TCACACCT
 A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCGTCACAC
TACGTCAT--
 A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCGTCACAC
-ACGTCA---
 A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C
A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTCGTCACAC--
----TCACACCT
 A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTCGTCACAC--
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCGTCACAC
GTGCCACGTCATCA
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCGTCACAC--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T