Information for 13-GCCTGAGGCCTCA (Motif 20)

T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
Reverse Opposite:
C G A T A T C G T G C A A C T G A C T G A G T C A G T C A G C T T A G C C T G A A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.844e+01
Information Content per bp:1.763
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif82.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets51.9 +/- 25.1bp
Average Position of motif in Background49.4 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGCCTCA
TGCCTGAGGCN---
 A C G T T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGCCTCA
NGCCTNAGGCN---
 A C G T T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGCCTCA
NGCCTGAGGCN---
 A C G T T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCCTGAGGCCTCA
SCCTSAGGSCAW-
 T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCCTGAGGCCTCA
GCCTCAGGGCAT-
 T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGCCTCA
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCCTGAGGCCTCA
---CNAGGCCT--
 T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCCTGAGGCCTCA
GGGGCCGAGGCCTG-
 A C G T A C G T T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCCTGAGGCCTCA
---CTAGGCCT--
 T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCTGAGGCCTCA
TCACCTCTGGGCAG-
 A C G T A C G T T A C G T G A C T G A C G A C T A T C G C T G A A C T G A C T G T A G C A G T C A C G T A T G C C G T A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T