Information for 6-WSCRAACACAGGGCAY (Motif 14)

C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
Reverse Opposite:
T C G A C G A T A C T G A G T C A G T C A G T C A C G T A C T G A G C T C T A G A C G T A C G T A G C T A T C G A T G C C G A T
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 26.2bp
Average Position of motif in Background38.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:WSCRAACACAGGGCAY
--AAAACAAAGG----
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:WSCRAACACAGGGCAY
----AACAAAGG----
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:WSCRAACACAGGGCAY
-----WDNCTGGGCA-
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:WSCRAACACAGGGCAY
------CAAAGGTCAG
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:WSCRAACACAGGGCAY
------CACAGN----
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:WSCRAACACAGGGCAY
---AAGCACATGG---
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WSCRAACACAGGGCAY
AGAAGAACAAAGGACTA
 A C G T C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:WSCRAACACAGGGCAY
--GGAACAAAGR----
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:WSCRAACACAGGGCAY
---GAACAATGGN---
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:WSCRAACACAGGGCAY
-------NGTGGGCAT
 C G T A A T C G A T G C C T G A C G T A C G T A A G T C C T G A A G T C C G T A A C T G A C T G A C T G A G T C G C T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T