Information for 9-GMATTWGTCASWT (Motif 12)

A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
Reverse Opposite:
C G T A C G T A T A C G A C G T A C T G C G T A A G T C C G A T C G T A C G T A A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.8 +/- 28.3bp
Average Position of motif in Background85.0 +/- 1.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GMATTWGTCASWT-
NNAATTAGTCACGGT
 A C G T A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

JUND/MA0491.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GMATTWGTCASWT
-NATGAGTCACN-
 A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T

FOS/MA0476.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GMATTWGTCASWT
-NATGAGTCANN-
 A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GMATTWGTCASWT
TCATCAATCA---
 A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GMATTWGTCASWT
RGCCATYAATCA---
 A C G T A C G T A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GMATTWGTCASWT
NNATGASTCATH-
 A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GMATTWGTCASWT---
--ATGAGTCATNTNNT
 A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GMATTWGTCASWT
-NATGAGTCACC-
 A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GMATTWGTCASWT
-GATGAGTCAT--
 A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GMATTWGTCASWT
-NATGASTCABNN
 A C T G G T A C G T C A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T G C C G A T A C G T
A C G T C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C