Information for 11-CTCACRGSYCAGK (Motif 22)

A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
Reverse Opposite:
T G C A A G T C A C G T A C T G C T A G T A C G A G T C A G C T A C T G A C G T A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.862
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets59.0 +/- 20.3bp
Average Position of motif in Background44.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCACRGSYCAGK
--CAAAGGTCAG-
 A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCACRGSYCAGK
--CACAGN-----
 A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCACRGSYCAGK---
-TCCCAGMCRAGCCCC
 A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTCACRGSYCAGK
GAGGTCAAAGGTCA--
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCACRGSYCAGK
GGGGTCAAAGGTCA--
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCACRGSYCAGK
GGGGTCAAAGGTCA--
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCACRGSYCAGK
GAGGTCAAAGGTCA--
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCACRGSYCAGK
GGGGTCAAAGGTCA--
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCACRGSYCAGK--
-----TGCCCAGNHW
 A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTCACRGSYCAGK
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C T C G A A C T G A T G C A G T C A G T C C G T A A C T G A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T