Information for 6-AGCAAKCAGAACA (Motif 10)

C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A
Reverse Opposite:
A C G T A T C G C G A T A C G T A G T C A C G T A C T G G T C A A C G T A C G T A C T G A T G C A C G T
p-value:1e-12
log p-value:-2.855e+01
Information Content per bp:1.835
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets35.8 +/- 26.5bp
Average Position of motif in Background57.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAKCAGAACA--
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGCAAKCAGAACA---
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCAAKCAGAACA
-CCAATCAA----
 C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGCAAKCAGAACA
AAATGGACCAATCAG----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCAAKCAGAACA
CCATCAATCAAA---
 A C G T A C G T C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCAAKCAGAACA-----
-AACACCAAAACAAAGGA
 C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCAAKCAGAACA---
-CAAACAACAACACCT
 C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCAAKCAGAACA
AGGAAACAGCTG-
 C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCAAKCAGAACA----
--ATGTCACAACAACAC
 C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCAAKCAGAACA
TCATCAATCA-----
 A C G T A C G T C G T A A T C G A G T C G T C A G T C A C A G T A G T C C G T A A C T G C G T A C G T A A T G C G T C A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T