Information for 10-GCACTCTGCA (Motif 20)

A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A
Reverse Opposite:
C G A T C T A G A T G C C G T A T C A G C G T A T A C G C A G T C T A G A G T C
p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.749
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif418.0
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets50.2 +/- 24.9bp
Average Position of motif in Background48.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCACTCTGCA--
GTGCCGTGTGCAAA
 A C G T A C G T A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCACTCTGCA----
TGGACTTTGNNCTCN
 A C G T A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCACTCTGCA-----
AATCGCACTGCATTCCG
 A C G T A C G T A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCACTCTGCA-
WYATGCATWATGCAT
 A C G T A C G T A C G T A C G T A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCACTCTGCA-----
TGGACTTTGNNCTNTG
 A C G T A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCACTCTGCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCACTCTGCA
VBSYGTCTGG-
 A C G T A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCACTCTGCA---
---ATTTGCATAA
 A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GCACTCTGCA
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCACTCTGCA---
---ATTTGCATAT
 A C T G A G T C G T C A A T G C G C A T A G T C A C G T A T C G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T