Information for 9-GKRGAGTACTCCACCT (Motif 9)

A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T
Reverse Opposite:
G T C A A C T G A T C G C A G T C T A G A T C G C G T A A C T G A G C T T G C A G T A C C G A T T A G C A G C T T G A C A G T C
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.746
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.1 +/- 21.0bp
Average Position of motif in Background55.4 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GKRGAGTACTCCACCT
CGAACAGTGCTCACTAT
 A C G T A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GKRGAGTACTCCACCT
TTCNAAGTACTTNNNNN
 A C G T A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GKRGAGTACTCCACCT
---CNGTCCTCCC---
 A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GKRGAGTACTCCACCT
-TTAAGTGCTT-----
 A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GKRGAGTACTCCACCT---
-------GCTCCGCCCMCY
 A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GKRGAGTACTCCACCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GKRGAGTACTCCACCT
NATTTAAGTACTTNAAA-
 A C G T A C G T A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GKRGAGTACTCCACCT--
--------TTCCCCCTAC
 A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GKRGAGTACTCCACCT
CTYRAGTGSY------
 A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:GKRGAGTACTCCACCT
---GGGGATTCCCCC-
 A C T G A C T G T C G A A C T G C G T A A C T G A C G T C T G A A G T C A C G T A T G C A G T C G T C A A T G C A G T C A C G T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T