Information for 7-GAGKGAAGAGGGAGAC (Motif 7)

A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
Reverse Opposite:
A C T G C G A T G T A C A C G T A G T C G T A C G T A C C G A T A G T C C A G T A C G T G T A C G T A C A G T C G A C T A T G C
p-value:1e-12
log p-value:-2.793e+01
Information Content per bp:1.681
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif90.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets49.1 +/- 21.6bp
Average Position of motif in Background49.4 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGKGAAGAGGGAGAC-
-----AGGTGHCAGACA
 A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAGKGAAGAGGGAGAC--
-----AGGTGNCAGACAG
 A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGKGAAGAGGGAGAC
------AGAGGAAGTG
 A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GAGKGAAGAGGGAGAC
------AGAGGAA---
 A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGKGAAGAGGGAGAC
--AAAAAGAGGAAGTA
 A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
A C G T A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GAGKGAAGAGGGAGAC
-----GGGCGGGAAGG
 A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GAGKGAAGAGGGAGAC
-----ANCAGGAAGT-
 A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GAGKGAAGAGGGAGAC
NNNNGGGGGAAGANGG----
 A C G T A C G T A C G T A C G T A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:-8
Orientation:forward strand
Alignment:--------GAGKGAAGAGGGAGAC
SMCAGTCWGAKGGAGGAGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GAGKGAAGAGGGAGAC
------GGCGGGAARN
 A T C G C T G A C T A G C A T G C A T G G T C A G C T A A C T G C G T A A C T G C A T G C T A G C G T A A C T G G C T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G