Information for 19-CCTTGCCCCGTTT (Motif 36)

A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G
p-value:1e-5
log p-value:-1.209e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 29.3bp
Average Position of motif in Background59.3 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCTTGCCCCGTTT
---TGCCCAGNHW
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCCCCGTTT
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTTGCCCCGTTT--
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCCCCGTTT
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCTTGCCCCGTTT
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCTTGCCCCGTTT
GAGCCCTTGTCCCTAA-
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCCCCGTTT
NNACTTGCCTT----
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCCCCGTTT
KGCCCTTCCCCA----
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGCCCCGTTT
BNTGDCCTTG--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCTTGCCCCGTTT
--ATGCCCACC--
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T