Information for 3-CAAGRGGGAG (Motif 3)

A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A T G C A G T C A G C T A G T C C A G T C G A T A C T G
p-value:1e-20
log p-value:-4.689e+01
Information Content per bp:1.787
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.63%
Number of Background Sequences with motif436.1
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets50.7 +/- 23.1bp
Average Position of motif in Background51.4 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAAGRGGGAG----
--TGGGGAAGGGCM
 A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAAGRGGGAG--
--AGAGGAAGTG
 A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G A C G T A C G T
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAAGRGGGAG-----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAAGRGGGAG-----
-----GGGAGGACNG
 A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAAGRGGGAG
---TGGGGA-
 A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAGRGGGAG--
-GGGCGGGAAGG
 A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAAGRGGGAG--
--GGCGGGAARN
 A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAGRGGGAG
GGAGGGGGAA
 A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

SPIC/MA0687.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAGRGGGAG--
AAAAAGAGGAAGTA
 A C G T A C G T A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G A C G T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAGRGGGAG---
TTAAGAGGAAGTTA
 A C G T A G T C G C T A G T C A C T A G C T G A A C T G A T C G T C A G C G T A A C T G A C G T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C