Information for 9-GCTACAGAAGGAA (Motif 19)

A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A
Reverse Opposite:
A C G T A C G T G T A C A G T C A C G T A C G T A G T C A C G T C T A G A C G T C G T A T C A G G T A C
p-value:1e-10
log p-value:-2.329e+01
Information Content per bp:1.741
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif77.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.5 +/- 26.7bp
Average Position of motif in Background50.8 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTACAGAAGGAA
GNCTATAAAAGG--
 A C G T A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCTACAGAAGGAA--
-----ANCAGGAAGT
 A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTACAGAAGGAA---
-GTATAAAAGGCGGGG
 A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTACAGAAGGAA---
-GTATAAAAGGCGGGG
 A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTACAGAAGGAA--
-----AVCAGGAAGT
 A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTACAGAAGGAA-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTACAGAAGGAA-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCTACAGAAGGAA-
-----AAAAGTCAA
 A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCTACAGAAGGAA--
-----ACVAGGAAGT
 A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTACAGAAGGAA
ACTATAAATAGA-
 A C T G A G T C A C G T G T C A A G T C C G T A C T A G G T C A C G T A T A C G A C T G G T C A G T C A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T