Information for 7-GAGCCATCTC (Motif 18)

A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C
Reverse Opposite:
A C T G C T G A T A C G C T G A C G A T A C T G A C T G A G T C G C A T A T G C
p-value:1e-10
log p-value:-2.365e+01
Information Content per bp:1.843
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif142.7
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets43.4 +/- 29.5bp
Average Position of motif in Background52.6 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAGCCATCTC--
--GCCATCTGTT
 A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCATCTC-
GCNGCCATCTTG
 A C G T A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCATCTC-----
CCNNACCATCTGGCCTN
 A C G T A C G T A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCATCTC
TGAGTCATTTC
 A C G T A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGCCATCTC--
--ACCATCTGTT
 A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCATCTC--
ATGAGTCATNTNNT
 A C G T A C G T A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C A C G T A C G T
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

FOSL2/MA0478.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCATCTC
NTGAGTCATCN-
 A C G T A C G T A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCATCTC
ATGAGTCAT---
 A C G T A C G T A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGCCATCTC
GATGAGTCATCC-
 A C G T A C G T A C G T A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C A C G T

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGCCATCTC
GATGAGTCATN--
 A C G T A C G T A C G T A T C G C G T A C T A G G T A C A G T C C G T A A G C T A T G C A G C T A G T C
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T