Information for 4-GCAACCTSCC (Motif 13)

A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C
Reverse Opposite:
A C T G A T C G A T C G C G T A A C T G C T A G C G A T A C G T A C T G A T G C
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.764
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif258.8
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets48.0 +/- 22.7bp
Average Position of motif in Background53.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAACCTSCC-
CTGGCAGNCTGCCA
 A C G T A C G T A C G T A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAACCTSCC
GCCATCTGTT
 A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAACCTSCC-
SNGCACCTGCHS
 A C G T A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCAACCTSCC-
TTGGCATGGTGCCA
 A C G T A C G T A C G T A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAACCTSCC
CNGTCCTCCC
 A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCAACCTSCC----
CGACCAACTGCCATGC
 A C G T A C G T A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCAACCTSCC---
CGACCAACTGCCGTG
 A C G T A C G T A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAACCTSCC--
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C G T A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAACCTSCC-
-CCAACTGCCA
 A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C A C G T
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCAACCTSCC
-NCACCTGTN
 A T C G G T A C G T C A G C T A G A T C A G T C A C G T A T G C A T G C G T A C
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T