Information for 3-TCGCTGGCTG (Motif 8)

G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G
Reverse Opposite:
T G A C C T G A C T A G T A G C G T A C G T C A A T C G T G A C T C A G C T G A
p-value:1e-9
log p-value:-2.123e+01
Information Content per bp:1.693
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif9.90%
Number of Background Sequences with motif2137.2
Percentage of Background Sequences with motif4.65%
Average Position of motif in Targets48.6 +/- 28.1bp
Average Position of motif in Background48.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCGCTGGCTG
-----NGCTN
 G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCGCTGGCTG-
---TWGTCTGV
 G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCGCTGGCTG---
CAATCACTGGCAGAAT
 A C G T A C G T A C G T G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TCGCTGGCTG--
------GCTGTG
 G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCGCTGGCTG-
---CTGTCTGG
 G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCGCTGGCTG--
TGATTGGCTANN
 G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCGCTGGCTG
---TTGGCA-
 G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCGCTGGCTG-----
TCNCCTGCTGNGNNN
 G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCGCTGGCTG-
--NTTGGCANN
 G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCGCTGGCTG-
GTCATGCHTGRCTGS
 A C G T A C G T A C G T A C G T G A C T A G T C A C T G T A G C C A G T C A T G A T C G G A T C G A C T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C