Information for 22-TCACAGGCATTTA (Motif 34)

C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
Reverse Opposite:
G A C T T C G A C G T A C T G A C G A T A C T G A G T C A G T C C G A T A T C G A C G T C T A G C G T A
p-value:1e-6
log p-value:-1.570e+01
Information Content per bp:1.721
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif49.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets50.2 +/- 30.4bp
Average Position of motif in Background54.4 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCACAGGCATTTA
-CACAGN------
 C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGCATTTA
CAATCACTGGCAGAAT
 A C G T A C G T A C G T C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGGCATTTA
NNATTGACAGGTGCTT-
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCACAGGCATTTA
TTGACAGC------
 A C G T C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCACAGGCATTTA-
---AAGGCAAGTGT
 C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGGCATTTA
GTATTGACAGGTNNTT-
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGCATTTA
ACATCAAAGGNA----
 A C G T A C G T A C G T C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TCACAGGCATTTA
AAAGATCAAAGGAA----
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGGCATTTA
TGAGTGACAGSC-----
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCACAGGCATTTA
--CNAGGCCT---
 C G A T A G T C C G T A A T G C C G T A C T A G T C A G A G T C G C T A A G C T G C A T A G C T C T G A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T