Information for 7-AATGGGGATTTCC (Motif 4)

G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C
Reverse Opposite:
C T A G T A C G C T G A G C T A C T G A C G A T G A T C T G A C G A T C G A T C G C T A A C G T C A G T
p-value:1e-14
log p-value:-3.230e+01
Information Content per bp:1.644
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif293.1
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets50.8 +/- 24.5bp
Average Position of motif in Background47.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.85
Offset:3
Orientation:forward strand
Alignment:AATGGGGATTTCC
---GGGGATTTCC
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.84
Offset:2
Orientation:forward strand
Alignment:AATGGGGATTTCC-
--NGGGGATTTCCC
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C A C G T
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.82
Offset:3
Orientation:forward strand
Alignment:AATGGGGATTTCC
---GGGGATTTCC
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.80
Offset:3
Orientation:forward strand
Alignment:AATGGGGATTTCC
---GGGAATTTCC
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:AATGGGGATTTCC
---GGGAATTTCC
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:AATGGGGATTTCC--
---GGGGATTCCCCC
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C A C G T A C G T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AATGGGGATTTCC--
--AGGGGATTCCCCT
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C A C G T A C G T
A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AATGGGGATTTCC--
--AGGGGATTCCCCT
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C A C G T A C G T
A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AATGGGGATTTCC---
------ATTTTCCATT
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.63
Offset:7
Orientation:forward strand
Alignment:AATGGGGATTTCC-
-------TTTTCCA
 G T C A T G C A C G A T C T A G C T A G A C T G C T A G G C T A G A C T C G A T A G C T A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A