Information for 6-CSCRAGGGTTTGT (Motif 3)

A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A G T C A C T G A A T G C G A T C A G T C A C G T A G C T A C T G A T C G A T C G
p-value:1e-14
log p-value:-3.242e+01
Information Content per bp:1.817
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 24.6bp
Average Position of motif in Background57.6 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CSCRAGGGTTTGT
-------CTTTGT
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:forward strand
Alignment:CSCRAGGGTTTGT-
--------ATTGTT
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CSCRAGGGTTTGT---
------CCWTTGTYYB
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CSCRAGGGTTTGT--
---GGGGGTGTGTCC
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CSCRAGGGTTTGT---
------CCATTGTTNY
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CSCRAGGGTTTGT----
--------ATTGTTTAN
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CSCRAGGGTTTGT---
------YCTTTGTTCC
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

ZBTB33/MA0527.1/Jaspar

Match Rank:8
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CSCRAGGGTTTGT
NAGNTCTCGCGAGAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CSCRAGGGTTTGT---
------CCTTTGTTTT
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CSCRAGGGTTTGT-
------CCWTTGTY
 A T G C A T G C A G T C C T G A C G T A A C T G C T A G A T C G A G C T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T