Information for 13-CAGCCGGCTC (Motif 20)

A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G G T C A C T A G A G T C A G T C T C A G A C T G A T G C C G A T A C T G
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.856
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif157.5
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets47.4 +/- 22.0bp
Average Position of motif in Background50.8 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGCCGGCTC
NAACAGCTGG---
 A C G T A C G T A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCGGCTC
HCAGCTGDTN-
 A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCGGCTC
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAGCCGGCTC
VNAVCAGCTGGC--
 A C G T A C G T A C G T A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGCCGGCTC
NCAGCTGCTG-
 A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCGGCTC
TACATCCGGGT-
 A C G T A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGCCGGCTC-
TGCAGCTGTCCCT
 A C G T A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGCCGGCTC
AGCAGCTGCTNN
 A C G T A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCGGCTC
AACAGATGGC--
 A C G T A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCGGCTC
GCAGCTGTNN-
 A C G T A G T C G C T A A T C G A G T C A G T C C T A G A C T G A G T C A C G T A G T C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T