Information for 9-AATTTTCTCCTTGGCT (Motif 17)

C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
Reverse Opposite:
G T C A A T C G G T A C A T G C C T G A C G T A A C T G A C T G C G T A C T A G C G T A C G T A C G T A C G T A C G A T A C G T
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.4 +/- 27.9bp
Average Position of motif in Background36.6 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATTTTCTCCTTGGCT
NNTGTTTATTTTGGCA
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AATTTTCTCCTTGGCT
-ANTTTCGCTTTCGN-
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
A C G T C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AATTTTCTCCTTGGCT
---BNTGDCCTTG---
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AATTTTCTCCTTGGCT
-----TGACCTTGAV-
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AATTTTCTCCTTGGCT
------CCGATTGGCT
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.53
Offset:10
Orientation:forward strand
Alignment:AATTTTCTCCTTGGCT
----------TTGGCA
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:AATTTTCTCCTTGGCT--
---------NTTGGCANN
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AATTTTCTCCTTGGCT
-ACTTTCACTTTC---
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AATTTTCTCCTTGGCT---
-------TGATTGGCTANN
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AATTTTCTCCTTGGCT
-----TGACCTTGAN-
 C G T A C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G C T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T