Information for 15-AAAACAACCC (Motif 40)

C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T
p-value:1e-6
log p-value:-1.438e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 36.8bp
Average Position of motif in Background38.4 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AAAACAACCC-
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AAAACAACCC
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAACAACCC
GTAAACAAT--
 A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAACAACCC--
CAAACAACAACACCT
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAACAACCC
GTAAACAA---
 A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AAAACAACCC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAACAACCC
-NANANAC--
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C
A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAACAACCC
GTAAACAA---
 A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAACAACCC------
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAACAACCC
RNAACAATGG
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A A G T C A G T C A G T C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G