Information for 3-AACTCTGACCAGC (Motif 4)

C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C T A G A T C G A C G T A G T C C T G A A C T G G T C A A C T G A G C T A C G T
p-value:1e-13
log p-value:-3.197e+01
Information Content per bp:1.840
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.8 +/- 20.5bp
Average Position of motif in Background55.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:9
Orientation:forward strand
Alignment:AACTCTGACCAGC-
---------CAGCC
 C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PH0032.1_Evx2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACTCTGACCAGC----
ANCGCTAATTAGCGGTN
 C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0098.1_Lhx8/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AACTCTGACCAGC----
ACCCCTAATTAGCGGTG
 C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0097.1_Lhx6_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AACTCTGACCAGC----
TCCACTAATTAGCGGTT
 C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AACTCTGACCAGC---
-TCCCAGMCRAGCCCC
 C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PH0155.1_Prrx2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AACTCTGACCAGC----
AAAGCTAATTAGCGAAA
 C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AACTCTGACCAGC
TGACCTCTGACCCCN
 A C G T A C G T C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AACTCTGACCAGC----
AGCGCTAATTAGCGATT
 C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AACTCTGACCAGC
-GCTATAAATAGC
 C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AACTCTGACCAGC
TGACCTTTGACCTC-
 A C G T A C G T C G T A C T G A A G T C A C G T A G T C A G C T C T A G T C G A A T G C A G T C C G T A A C T G A G T C
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T